SubtiBank SubtiBank
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Thu Oct 01 2015 13:51:44 GMT+0200 (CEST)2025-05-02 15:07:09

description

glycine betaine/carnitine/choline ABC transporter

glycine betaine/carnitine/choline/arsenobetaine/arsenocholine [SW|ABC transporter]

locus

BSU33800

BSU_33800

product

glycine betaine/carnitine/choline ABC transporter

glycine betaine/carnitine/choline/arsenobetaine/arsenocholine [SW|ABC transporter]

ec

outlinks

subtilist

gene_detail+BG12640

gene_detail BG12640

outlinks

bsu

BSU33800

BSU_33800

syns

yvbB

[SW|Categories] containing this gene/protein

[SW|ABC transporters], [SW|coping with hyper-osmotic stress], [SW|membrane proteins]

The protein

Protein family

CysTW subfamily (according to Swiss-Prot)

[SW|Binding-protein-dependent transport system permease family] (according to UniProt)

[SW|CysTW subfamily] (according to UniProt)

The protein

Paralogous protein(s)

[SW|OpuBD]

[[this]]

The protein

[SW|Interactions]

[SW|OpuCA]-([SW|OpuCB]-[SW|OpuCD])-[SW|OpuCC] [Pubmed|10092453]

Expression and Regulation

Operon

''[SW|opuCA]-[SW|opuCB]-[SW|opuCC]-[SW|opuCD]'' [Pubmed|10216873]

Expression and Regulation

Regulation

induced by salt stress [Pubmed|23960087,10216873]

repressed by choline ([[protein|OpcR]]) [Pubmed|23960087]

Expression and Regulation

Regulatory mechanism

[[protein|OpcR]]: transcription repression [Pubmed|23960087]

[[protein|RemA]]: transcription activation [Pubmed|23646920]

References

10092453, 9925583, 10216873, 21296969, 23960087, 23646920

proteinLength

229

geneLength

690

Gene

Coordinates

3,467,546 3,468,235

The protein

Catalyzed reaction/ biological activity

uptake of glycine betaine, arsenocholine and arsenobetaine [pubmed|29159878]

The protein

[SW|Domains]

[SW|ABC transmembrane type-1 domain] (aa 22-202) (according to UniProt)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

BKE33800 ([[gene|opuCD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCCATATGATCCACCTCTT, downstream forward: _UP4_TAAATACAACAGAGGTGGTT

BKK33800 ([[gene|opuCD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCCATATGATCCACCTCTT, downstream forward: _UP4_TAAATACAACAGAGGTGGTT

References

Reviews

27935846

References

Original publications

10092453, 9925583, 10216873, 21296969, 23960087, 23646920, 29159878