2017-05-24 13:36:052025-04-11 12:36:57
description
MarR/DUF24 family transcription repressor of azoR1, catD-catE and yodC expression
[SW|MarR family|MarR/DUF24 family] transcription repressor of [[gene|azoR1]], [[gene|catD]]-[[gene|catE ]]and [[gene|yodC ]]expression
locus
BSU19540
BSU_19540
geneLength
336
339
product
MarR/DUF24 family transcription repressor
[SW|MarR family|MarR/DUF24 family] transcription repressor
outlinks
bsu
BSU19540
BSU_19540
Gene
Coordinates
2,127,345 → 2,127,683
2,127,345 2,127,683
The protein
Protein family
[[MarR/DUF24 family]]
[SW|MarR family|MarR/DUF24 family]
The protein
Paralogous protein(s)
[[protein|CatR]], [[protein|YdzF]]
[[this]]
Biological materials
Mutant
MGNA-B433 (yodB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1432 NBRP B. subtilis, Japan]
BKE19540 ''yodB''::''erm trpC2'' is available from the Bacillus Genetic Stock Center
MGNA-B433 (yodB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1432 NBRP B. subtilis, Japan]
BKE19540 ([[gene|yodB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAGTCTTCATCCCTTCA, downstream forward: _UP4_TAAGGAAAGCGGCACCTGAA
BKK19540 ([[gene|yodB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAGTCTTCATCCCTTCA, downstream forward: _UP4_TAAGGAAAGCGGCACCTGAA
Labs working on this gene/protein
[SW|Haike Antelmann],University of Greifswald, Germany
The protein
[SW|Domains]
[SW|HTH hxlR-type domain] (aa 6-105) (according to UniProt)
The protein
additional information
information on binding sites can be found in the [http://www.prodoric2.de/detail.php?acc=MX000216 PRODORIC2 database]
labs
[SW|Haike Antelmann],University of Greifswald, Germany