Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-26 00:18:25
description
general stress protein, similar to alcohol dehydrogenase,
general stress protein, similar to alcohol dehydrogenase
locus
BSU10430
BSU_10430
ec
outlinks
bsu
BSU10430
BSU_10430
aminos
MSDSNLTNPIKAFFHDEFPEQYQEPPGLQKNMKPVPDCGEKSYKGSGKLTGRKALVTGGDSGIGRAAAIAYAREGADVAINYLPEEQPDAEEVKELIEAEGRKAVLIPGDLSDESFCQDLVKQSHHELGGLDVLALVAGKQQAVENIEDLPTEQIYKTFEVNVFSLYWVVKAALPYLPEGASIITTTSVEGYNPSPMLLDYAATKNAIIGFTVGLGKQLASKGIRVNSVAPGPIWTPLQISGGQPTENIPKFGQGTPPAPLNRAGQPVELADVYVFLASENSSYVTSQVYGITGGIPTA
[SW|Categories] containing this gene/protein
[SW|general stress proteins (controlled by SigB)], [SW|poorly characterized/ putative enzymes]
Gene
Coordinates on the chromosome (coding sequence)
1,117,734 -> 1,118,633
The protein
Protein family
short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)
[SW|Short-chain dehydrogenases/reductases (SDR) family] (according to UniProt)
Expression and Regulation
Operon
''yhxD'' [Pubmed|8196543]
Expression and Regulation
[SW|Sigma factor]
[[protein|SigB]] [Pubmed|15805528]
Expression and Regulation
Regulation
induced by stress ([[protein|SigB]]) [Pubmed|15805528]
Expression and Regulation
Additional information
the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed]
proteinLength
299
geneLength
900
Gene
Coordinates
1,117,734 1,118,633
The protein
Paralogous protein(s)
[[this]]
The protein
Structure
[PDB|3R3S] (from ''Salmonella Enterica'', 66% identity)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-A719 (yhxD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/719 NBRP B. subtilis, Japan]
BKE10430 ([[gene|yhxD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10430 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAGCAACGCTCCTTTTC, downstream forward: _UP4_TAGCTTTATGAAAGGAGCTG
BKK10430 ([[gene|yhxD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10430 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAGCAACGCTCCTTTTC, downstream forward: _UP4_TAGCTTTATGAAAGGAGCTG