SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:32 GMT+0100 (CET)2025-05-13 02:31:40

description

similar to ABC transporter (ATP-binding protein)

similar to [SW|ABC transporter] (ATP-binding protein)

locus

BSU14320

BSU_14320

product

ABC transporter (ATP-binding protein)

[SW|ABC transporter] (ATP-binding protein)

ec

outlinks

bsu

BSU14320

BSU_14320

aminos

METFKRLKMYYWPYRKVFMWSLLAMLLMTAITVVYPIILQITIDEIVLGRQYQLAAWVSLGFIAVMVLKGMATFFHQYLGDMFGIKSVYRLRNGLYEKLQRLSFSYYDNAKTGDLMSRLTADVEGLRFFLSYGLAELIRFGLLVAISLSVMFYYSVPLTLVTIAVLPFLAVAVYRFDKRVHPAFRGIRKSFAKLNTKVQENISGINTVKSLSREDFQISTFNKANAEYRAQYLQTSSIWSAYFPLMEFIGNTCIVALLSYGGYLVMQNQLNPGELVAFFSLVNYMMWPIMNLGFVINMFSQAKASGERLLDILEKEEDITDHPHALHKQKLTGDVHFKNVSLAYGKEQTNALCNVSFEANSGKVIGLLGPTGSGKSSVTQLLTRFYSPVGGMITIDHKPITDYSLKTLRSNIGVVLQESFLFSSTIRSNISYGRPDASMEDVIEAAKRAQAHNFIMELPDGYDTMLGERGMGLSGGQKQRIAIARAICLNPSILILDDATSAVDMQTEHSIQLALKEVMKNRTTFIVAHRISSLKHADEILVFNKGRIRERGTHHELLEKGGYYKKIYDLQYRDVKMINEPHEVG

[SW|Categories] containing this gene/protein

[SW|ABC transporters], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

1,499,889 -> 1,501,646

The protein

Protein family

[SW|ABC transporter] domain (according to Swiss-Prot)

[SW|ABC transporter superfamily] (according to UniProt)

The protein

[SW|Domains]

has both a membrane-spanning and an ATP-binding domain [Pubmed|10092453]

has both a membrane-spanning and an ATP-binding domain [Pubmed|10092453]

[SW|ABC transmembrane type-1 domain] (aa 18-301) (according to UniProt)

[SW|ABC transporter domain] (aa 335-570) (according to UniProt)

The protein

[SW|Interactions]

[[protein|YknU]]-[[protein|YknV]] [Pubmed|10092453]

References

10092453

10092453, 28069938

proteinLength

585

geneLength

1758

Gene

Coordinates

1,499,889 1,501,646

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|5MKK] (TmrAB complex from Thermus thermophilus, 37% identity) [pubmed|28069938]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B346 (yknU::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1345 NBRP B. subtilis, Japan]

BKE14320 ([[gene|yknU]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCCAGCACCTTTCCAA, downstream forward: _UP4_GAGGTCGGATAGGGAGGGGC

BKK14320 ([[gene|yknU]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14320 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCCAGCACCTTTCCAA, downstream forward: _UP4_GAGGTCGGATAGGGAGGGGC