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Tue Dec 13 2016 11:16:30 GMT+0100 (CET)2025-05-31 14:56:50

description

two-component response regulator (OmpR family), active under anaerobic conditions

two-component response regulator ([SW|OmpR family]), active under anaerobic conditions

locus

BSU03750

BSU_03750

product

two-component response regulator (OmpR family)

two-component response regulator ([SW|OmpR family])

ec

outlinks

bsu

BSU03750

BSU_03750

aminos

MKILMIEDNVSVCTMTEMFFFKEGFEAEFVHDGLEGYQRFTEENWDLIILDIMLPSMDGVTICRKIRETSTVPIIMLTAKDTESDQVIGFEMGADDYVTKPFSPLTLVARIKAVIRRYKATGKAVIDEDMIETECFTINKKTREVLLNGEPVENLTPKEFDLLYYLVQNPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKLASEDKPFLYTVWGVGYKFDED

[SW|Categories] containing this gene/protein

[SW|transcription factors and their control], [SW|phosphoproteins]

Gene

Coordinates on the chromosome (coding sequence)

426,577 -> 427,260

The protein

[SW|Interactions]

[[protein|YclK]]-[[protein|YclJ]] (putative)

Expression and Regulation

Operon

''[[protein|yclJ]]-[[protein|yclK]] [Pubmed|15375128]

Expression and Regulation

Regulation

expressed under anaerobic conditions ([[protein|ResD]]) [Pubmed|15375128]

Expression and Regulation

Regulatory mechanism

[[protein|ResD]]: transcription activation [Pubmed|15375128]

References

10094672, 20512483, 15375128, 23504016

10094672, 20512483, 15375128, 23504016, 17942407

proteinLength

227

geneLength

684

Gene

Coordinates

426,577 427,260

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|Response regulatory domain] (aa 2-115) (according to UniProt)

The protein

Structure

[PDB|2OQR] (RegX3 from Mycobacterium tuberculosis, 42% identity) [pubmed|17942407]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-C007 (yclJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2005 NBRP B. subtilis, Japan]

BKE03750 ([[gene|yclJ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE03750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATATCCTCCGGTTGTT, downstream forward: _UP4_ACTGTGTGGGGAGTAGGGTA

BKK03750 ([[gene|yclJ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK03750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATATCCTCCGGTTGTT, downstream forward: _UP4_ACTGTGTGGGGAGTAGGGTA