Tue Dec 13 2016 11:16:35 GMT+0100 (CET)2025-05-28 01:04:28
locus
BSU30880
BSU_30880
ec
outlinks
bsu
BSU30880
BSU_30880
aminos
MKLAFICTEKLPAPAVRGGAIQMMIDGVTPYFSSRYDLTIFSIEDPSLPKRETKDGVHYIHLPKEHYREAVAEELRASSFDLIHVFNRPLNVSLYKKASPNSKIVLSLHNEMFSEKKMTFAQGKEVLDNVSMITTVSEFIKQTVIERFPEAEDITKVVYSGVDLNSYPPVWTMKGSAVRKTYRKKYGIEDKKVILFAGRLSPTKGPHLLIHSMRRILQQHPDAVLVIAGGKWFSDDSENQYVTYLRTLALPYRDHIIFTKFIPADDIPNLFLMADVFVCSSQWNEPLARVNYEAMAAGTPLITTNRGGNGEVVKHEVTGLVIDSYNKPSSFAKAIDRAFTDQELMNKMTKNARKHVEALFTFTHAAKRLNTVYQSVLTPKNKQFPPPFLTQNFDLSSINQLFVKAKT
[SW|Categories] containing this gene/protein
[SW|sporulation proteins]
Gene
Coordinates on the chromosome (coding sequence)
3,157,961 -> 3,159,184
The protein
Paralogous protein(s)
[SW|CotSA]
[[this]]
Expression and Regulation
Operon
''[[protein|ytcA]]-[[protein|ytcB]]-[[protein|ytcC]]'' [Pubmed|22383849]
Expression and Regulation
[SW|Sigma factor]
[[protein|SigK]] [Pubmed|22383849,15699190,12480901]
Expression and Regulation
Regulation
expressed late during sporulation in the mother cell ([[protein|SigK]], [SW|GerE]) [Pubmed|26577401,15699190,12480901]
Expression and Regulation
Regulatory mechanism
[SW|GerE]: transcription repression [Pubmed|26577401]
Expression and Regulation
Additional information
[[protein|translation]] is likely to require [[protein|Efp]] due to the presence of several consecutive proline residues [PubMed|23239624,23239623]
translation is likely to require [[protein|Efp]] due to the presence of several consecutive proline residues [PubMed|23239624,23239623]
proteinLength
407
geneLength
1224
Gene
Coordinates
3,157,961 3,159,184
The protein
Protein family
[SW|glycosyltransferase 1 family] (according to UniProt)
[SW|Glycosyltransferase 4 subfamily] (according to UniProt)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-A278 (ytcC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/278 NBRP B. subtilis, Japan]
BKE30880 ([[gene|ytcC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30880 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTTATTCCCCCTGATA, downstream forward: _UP4_TAAAACCTACAGCTCGTGTT
BKK30880 ([[gene|ytcC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30880 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTTATTCCCCCTGATA, downstream forward: _UP4_TAAAACCTACAGCTCGTGTT