Tue Dec 13 2016 11:16:33 GMT+0100 (CET)2025-05-27 21:34:34
description
similar to rRNA adenosine methyltransferase for modification of 23S rRNA
similar to RNA adenosine methyltransferase
locus
BSU15750
BSU_15750
function
rRNA modification
RNA modification
product
rRNA methyltransferase
RNA methyltransferase
ec
names
yloN
yloN
rlmN
outlinks
bsu
BSU15750
BSU_15750
aminos
MAELNKTKVRKELRTERPSIYSFELDEIKQWLTDNGEKPFRAAQIFEWLYEKRVSSFEDMTNLSKDLREKLNTRFVLTTLKTAVKQTSQDGTMKFLFELHDGYTIETVLMRHEYGNSVCVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVKVQKALDETDERVSSVVIMGIGEPFDNFNEMLAFLKIINHDKGLNIGARHITVSTSGIIPKIYEFADQQMQINFAISLHAPNTEIRSRLMPINRAYKLPDLMEAVKYYINKTGRRISFEYGLFGGVNDQVEHAEELADLLEGVKCHVNLIPVNYVPERDYVRTPRDQIFAFEKTLKSRGVNVTIRREQGHDIDAACGQLRAKERQDETR
[SW|Categories] containing this gene/protein
[SW|translation]
Gene
Coordinates on the chromosome (coding sequence)
1,649,286 -> 1,650,377
The protein
Protein family
RlmN family (according to Swiss-Prot), SAM enzyme superfamily
[SW|Radical SAM superfamily] (according to UniProt)
Biological materials
Mutant
1A819 ( ''yloN''::''erm''), [Pubmed|12682299], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A819&Search=1A819 BGSC]
MGNA-B132 (yloN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1131 NBRP B. subtilis, Japan]
1A819 ( ''yloN''::''erm''), [Pubmed|12682299], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A819&Search=1A819 BGSC]
BKE15750 ([[gene|yloN]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTTTTATTAAGTTCTGCCA, downstream forward: _UP4_CAAGACGAGACGAGGTGATG
BKK15750 ([[gene|yloN]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTTTTATTAAGTTCTGCCA, downstream forward: _UP4_CAAGACGAGACGAGGTGATG
References
proteinLength
363
geneLength
1092
Gene
Coordinates
1,649,286 1,650,377
The protein
Catalyzed reaction/ biological activity
methylates C-2 in A2503 in 23S rRNA and A37 in tRNA [pubmed|23752511]
adenosine2503 in 23S rRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine --> 2-methyladenosine2503 in 23S rRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine (according to UniProt)
adenosine37 in tRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine --> 2-methyladenosine37 in tRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine (according to UniProt)
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Cofactors]
Fe-S cluster [pubmed|29292548]
The protein
Structure
[PDB|3RF9] (from E. coli, 38% identity) [pubmed|21527678]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]