2017-05-29 11:56:422025-05-30 15:28:44
description
UDP-sugar epimerase, required for extracellular polysaccharide synthesis, this gene is inactive in B. subtilis 168
UDP-N-acetylglucosamine 4,6-dehydratase, required for extracellular polysaccharide synthesis, this gene is inactive in B. subtilis 168
locus
BSU34350
BSU_34350
geneLength
1794
1797
function
biofilm formation
[[category|Biofilm formation]], biosynthesis of N,N'-diacetylbacillosamine
product
unknown
UDP-N-acetylglucosamine 4,6-dehydratase
ec
outlinks
bsu
BSU34350
BSU_34350
Gene
Coordinates
3,526,407 → 3,528,203
3,526,407 3,528,203
The protein
Protein family
polysaccharide synthase family (according to Swiss-Prot)
[SW|Polysaccharide synthase family] (according to UniProt)
The protein
Paralogous protein(s)
SpsM ([[protein|YodU]], [[protein|YpqP]])
[[this]]
Biological materials
Mutant
MGNA-A071 (yveM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/71 NBRP B. subtilis, Japan]
MGNA-A071 (yveM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/71 NBRP B. subtilis, Japan]
BKE34350 ([[gene|epsC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGACAGTCTTCTCCGGT, downstream forward: _UP4_AGCGTTCATTAGGGGGAGTG
BKK34350 ([[gene|epsC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGACAGTCTTCTCCGGT, downstream forward: _UP4_AGCGTTCATTAGGGGGAGTG
=The EAR [SW|RNA switch]=
The protein
[SW|Cofactors]
NAD+ [pubmed|30222950]
The protein
Structure
[PDB|5BJW] (from Campylobacter jejuni, corresponds to the C-terminal part of EpsC, aa 242 ... 571, 47% identity) [pubmed|29053280]
References
Research papers
References
The EAR [SW|RNA switch]