SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:32 GMT+0100 (CET)2025-05-15 04:18:57

locus

BSU13330

BSU_13330

outlinks

bsu

BSU13330

BSU_13330

aminos

MSNLLKSALEKERRHYSEKLYQIGVYNKEVMNKMTISELRKEYAYFFRSITNHKNYPYTR

[SW|Categories] containing this gene/protein

[SW|proteins of unknown function]

Gene

Coordinates on the chromosome (coding sequence)

1,398,181 -> 1,398,363

Expression and Regulation

Operon

''[[protein|ykzB]]-[[protein|ykoL]]'' [Pubmed|10671441]

''[[protein|ykoL]]'' [Pubmed|10671441]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|10671441]

Expression and Regulation

Regulation

''[[protein|ykzB]]'': expressed in the absence of good nitrogen sources (glutamine or ammonium) ([[protein|TnrA]]) [Pubmed|10671441]

''[[protein|ykoL]]'': induced by phosphate limitation ([[protein|PhoP]]) [Pubmed|10671441]

Expression and Regulation

Regulatory mechanism

[[protein|TnrA]]: transcription activation [Pubmed|10671441]

[[protein|PhoP]]: transcription activation [Pubmed|10671441]

proteinLength

60

geneLength

183

Gene

Coordinates

1,398,181 1,398,363

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A776 (ykoL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/776 NBRP B. subtilis, Japan]

BKE13330 ([[gene|ykoL]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13330 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCGTCCTCCTTCATTT, downstream forward: _UP4_TAATGTATAAGGATTTTTTT

BKK13330 ([[gene|ykoL]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13330 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCGTCCTCCTTCATTT, downstream forward: _UP4_TAATGTATAAGGATTTTTTT