Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-10 20:07:08
description
similar to transcriptional regulator (TetR family)
similar to transcriptional regulator ([SW|TetR family])
locus
BSU10150
BSU_10150
ec
outlinks
bsu
BSU10150
BSU_10150
aminos
MSIDRKKLILEAATKSFTQFGYKATTMDLVAKLANVGKGTIYTFFKNKEELFDEIFTTLLKEMKQKADEAMEPSLPFHENVHRALFAILEFRKTHQLTIKIFQENAEIGTMAVQEVIQKMERSILSYIKSKIEDGIKSGAIKPCDPELTAFVMLKLYIALIFDWEKQHPPLDKETIAGLLELYVVKGLSAN
[SW|Categories] containing this gene/protein
[SW|transcription factors and their control]
Gene
Coordinates on the chromosome (coding sequence)
1,089,755 -> 1,090,330
References
Original publications
proteinLength
191
geneLength
576
Gene
Coordinates
1,089,755 1,090,330
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|HTH tetR-type domain] (aa 3-63) (according to UniProt)
The protein
Structure
[PDB|5K7F] (from Myxococcus xanthus, 24% identity) [pubmed|27940564]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-B504 (yhgD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1503 NBRP B. subtilis, Japan]
BKE10150 ([[gene|yhgD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGTATTCACCTCGAAAC, downstream forward: _UP4_TAGATAATCCTTTCTCTTTG
BKK10150 ([[gene|yhgD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGTATTCACCTCGAAAC, downstream forward: _UP4_TAGATAATCCTTTCTCTTTG
References
Research papers