Tue Dec 13 2016 11:16:29 GMT+0100 (CET)2025-05-25 23:11:23
title
yabB
trmN6
description
unknown
tRNA methyltransferase
locus
BSU00340
BSU_00340
function
unknown
tRNA modification
product
unknown
tRNA methyltransferase
ec
names
yabB
trmN6
yabB
outlinks
bsu
BSU00340
BSU_00340
aminos
MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPIQKGKIVDLCTGNGIVPLLLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTLEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPKQGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK
[SW|Categories] containing this gene/protein
[SW|proteins of unknown function]
Gene
Coordinates on the chromosome (coding sequence)
42,917 -> 43,660
Expression and Regulation
Operon
''[[protein|darA]]-[[protein|yaaR]]-[[protein|holB]]-[[protein|yaaT]]-[[protein|yabA]]-[[protein|yabB]]-[[protein|yazA]]-[[protein|yabC]]'' [Pubmed|22383849]
proteinLength
247
geneLength
744
Gene
Coordinates
42,917 43,660
The protein
Paralogous protein(s)
[[this]]
The protein
Structure
[PDB|3LPM] (putative methyltransferase from Listeria monocytogenes, 64% identity)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-B901 (yabB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1900 NBRP B. subtilis, Japan]
BKE00340 ([[gene|trmN6]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE00340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTCTTATCCTTTCAGT, downstream forward: _UP4_ACAAAAGAAATCAGGACCAT
BKK00340 ([[gene|trmN6]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK00340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTCTTATCCTTTCAGT, downstream forward: _UP4_ACAAAAGAAATCAGGACCAT