SubtiBank SubtiBank
Version comparison:

2017-05-09 15:36:342025-04-05 02:54:30

description

DNA-binding protein, spatial regulator of cell division to protect the nucleoid, and timing device with an important role in the coordination of chromosome segregation and cell division, Z ring placement

DNA-binding protein, spatial regulator of [SW|cell division] to protect the nucleoid, and timing device with an important role in the coordination of chromosome segregation and [SW|cell division], Z ring placement, coordination of early steps in DNA replication with establishment of a medial division site

locus

BSU40990

BSU_40990

geneLength

849

852

function

control of cell division

control of [SW|cell division]

ec

outlinks

bsu

BSU40990

BSU_40990

Gene

Coordinates

4,207,897 → 4,208,748

4,207,897 4,208,748

The protein

Catalyzed reaction/ biological activity

binds specific sites on the chromosome [Pubmed|19494834]

binds specific sites on the chromosome [Pubmed|19494834]

prevents Z ring assembly over the bacterial nucleoid and helps fine tune the assembly of the Z ring at midcell during the cell cycle [pubmed|31152469]

The protein

Protein family

ParB family (according to Swiss-Prot)

ParB family (with [[protein|ParB]], according to UniProt)

The protein

Paralogous protein(s)

[[protein|ParA]]

[[this]]

Biological materials

Mutant

MGNA-B874 (yyaA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1873 NBRP B. subtilis, Japan]

MGNA-B874 (yyaA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1873 NBRP B. subtilis, Japan]

BKE40990 ([[gene|noc]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTACCTACACCACCTTT, downstream forward: _UP4_TAGAAGCTCTCCTGAAAAGC

BKK40990 ([[gene|noc]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTACCTACACCACCTTT, downstream forward: _UP4_TAGAAGCTCTCCTGAAAAGC

Labs working on this gene/protein

Jeff Errington, Newcastle, UK [http://www.ncl.ac.uk/camb/staff/profile/jeff.errington Homepage]

References

Reviews

19680248, 19884039, 25460802, 26706151

19680248, 19884039, 25460802, 26706151, 28500529, 31254421

References

Original Publications

16549676, 11807071, 19494834, 15210112, 11948146, 22457634, 23701187, 24097947, 25568309, 26020636

16549676, 11807071, 19494834, 15210112, 11948146, 22457634, 23701187, 24097947, 25568309, 26020636, 28723932, 15228524, 31152469

The protein

Structure

[PDB|1VZ0] ([[protein|ParB]] from Thermus thermophilus, 48% from aa 30 ... 219) [pubmed|15228524]

labs

Jeff Errington, Newcastle, UK [http://www.ncl.ac.uk/camb/staff/profile/jeff.errington Homepage]

David Rudner, Harvard, USA [http://rudnerlab.med.harvard.edu/ Homepage]