SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-16 05:05:34

locus

BSU11490

BSU_11490

ec

outlinks

bsu

BSU11490

BSU_11490

aminos

MNWYEKLSEYFPIEEMKSKAHMEALLKERSDIYHKDEGKHHILMFAEFDSFIFVDYLYVSKDARGQGLGGKLIAKLKKKNKPILLEVEPVDEDDTDTEKRLRFYQREHFKHAQSIGYRRRSLATNEVNKMEILYWSPKTESEEEILEAMKQTYENIHTYKDEKWYGESYEKTDEVLEIIDEEKQKNIFDQLS

[SW|Categories] containing this gene/protein

[SW|general stress proteins (controlled by SigB)], [SW|resistance against oxidative and electrophile stress], [SW|cell envelope stress proteins (controlled by SigM, V, W, X, Y)]

Gene

Coordinates on the chromosome (coding sequence)

1,226,938 -> 1,227,516

Expression and Regulation

Operon

''[[protein|yjbC]]-[[protein|spx]]'' [Pubmed|10913081]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigW]], [[protein|SigB]], [[protein|SigX]], [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Abstract&list_uids=+10913081 PubMed], [[protein|SigM]] [Pubmed|17434969]

Expression and Regulation

Regulation

induced by stress ([[protein|SigB]]) [Pubmed|15805528]

transcription is represed by [SW|YodB ] [Pubmed|17158660]

repressed in the absence of hydrogen peroxide ([[protein|PerR]]) [Pubmed|17158660]

Expression and Regulation

Regulatory mechanism

transcription repression

[[protein|PerR]]: transcription repression [Pubmed|17158660]

Expression and Regulation

Additional information

the mRNA is substantially stabilized upon depletion of [[Rny|RNase Y]] [PubMed|21815947]

proteinLength

192

geneLength

579

Gene

Coordinates

1,226,938 1,227,516

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|N-acetyltransferase domain] (aa 1-139) (according to UniProt)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B150 (yjbC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1149 NBRP B. subtilis, Japan]

BKE11490 ([[gene|yjbC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATTTGCTCCTTATGA, downstream forward: _UP4_TAATTGAGAATAAGAACATA

BKK11490 ([[gene|yjbC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGATTTGCTCCTTATGA, downstream forward: _UP4_TAATTGAGAATAAGAACATA