SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:33 GMT+0100 (CET)2025-05-30 14:56:21

locus

BSU18480

BSU_18480

outlinks

uniprot

P14383

P0CI77

outlinks

bsu

BSU18480

BSU_18480

aminos

45))BacillussubtilissubtilisMLPIFDQKKVAFIGAGSMAEGMISGIVRANKIPKQNICVTNRSNTERLTELELQYGIKGALPNQLCIEDMDVLILAMKPKDAENALSSLKSRIQPHQLILSVLAGITTSFIEQSLLNEQPVVRVMPNTSSMIGASATAIALGKYVSEDLKKLAEALLGCMGEVYTIQENQMDIFTGIAGSGPAYFYYLMEFIEKTGEEAGLDKQLSRSIGAQTLLGAAKMLMETGEHPEILRDNITSPNGTTAAGLQALKKSGGGEAISQAIKHAAKRSKEISEDIEKTAAPLSGVIK

[SW|Categories] containing this gene/protein

[SW|biosynthesis/ acquisition of amino acids], [SW|coping with hyper-osmotic stress]

Gene

Coordinates on the chromosome (coding sequence)

2,016,845 -> 2,017,738

The protein

Catalyzed reaction/ biological activity

L-proline NAD(P) = 1-pyrroline-5-carboxylate NAD(P)H (according to Swiss-Prot)

1-pyrroline-5-carboxylate + NAD(P)H + H+ --> L-proline + NAD(P)+ [pubmed|28824574]

The protein

Protein family

glutamate 5-kinase family (according to Swiss-Prot)

[SW|pyrroline-5-carboxylate reductase family] [pubmed|28824574]

The protein

Paralogous protein(s)

[[protein|ProI]]

[[this]]

The protein

Structure

[PDB|5BSE] (from ''Medicago trunculata'', 36% identity)

[PDB|5BSE] (from ''Medicago truncatula'', 36% identity) [pubmed|26579138]

Expression and Regulation

Operon

''[[protein|proH]]-[[protein|proJ]]'' [Pubmed|21296969]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|21784929]

Expression and Regulation

Regulation

expressed under conditions of osmotic stress [Pubmed|21784929]

induced by cold stress [Pubmed|21296969]

expression during spore [SW|germination] is increased under conditions of osmotic stress [Pubmed|27766092]

References

Original publications

11418582, 21296969, 25344233, 21784929, 27766092

11418582, 21296969, 25344233, 21784929, 27766092, 28752945, 28824574, 26579138

proteinLength

297

geneLength

894

Gene

Coordinates

2,016,845 2,017,738

The protein

[SW|Cofactors]

NADPH [pubmed|28824574]

The protein

Effectors of protein activity

feedback-inhibited by proline [pubmed|28824574]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

HB24914 ([[gene|proH]]::''erm''), available in [SW|John Helmann]'s and [SW|Jörg Stülke]'s labs

MGNA-B083 (proH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1082 NBRP B. subtilis, Japan]

BKE18480 ([[gene|proH]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCACACGTTTAAAAT, downstream forward: _UP4_GCGCCGCTATCAGGAGTGAT

BKK18480 ([[gene|proH]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCACACGTTTAAAAT, downstream forward: _UP4_GCGCCGCTATCAGGAGTGAT