2018-10-21 18:18:542025-05-24 04:54:07
locus
BSU14560
BSU_14560
geneLength
552
555
outlinks
bsu
BSU14560
BSU_14560
Gene
Coordinates
1,526,195 → 1,526,749
1,526,195 1,526,749
The protein
Catalyzed reaction/ biological activity
N-acetylcysteine -→ cysteine + acetate [Pubmed|23944997]
N-acetylcysteine - cysteine + acetate [Pubmed|23944997]
H2O + N-terminal N-formyl-L-methionyl-[peptide] --> formate + N-terminal L-methionyl-[peptide] (according to UniProt)
The protein
Protein family
polypeptide deformylase family (according to Swiss-Prot)
polypeptide deformylase family (with [[protein|DefA]], according to UniProt)
The protein
Structure
[PDB|1LQY] (complex with antibiotic actinonin, Geobacillus stearothermophilus)
[PDB|1LQY] (complex with antibiotic actinonin, Geobacillus stearothermophilus, 67% identity) [pubmed|12126617]
Biological materials
Mutant
MGNA-A901 (ykrB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/901 NBRP B. subtilis, Japan]
BKE14560 (Δ[[gene|defB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGAAACTTCACTCCTAAA, downstream forward: _UP4_TAAAAGAGAAAACGGCTGGC
BKK14560 (Δ[[gene|defB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGAAACTTCACTCCTAAA, downstream forward: _UP4_TAAAAGAGAAAACGGCTGGC
MGNA-A901 (ykrB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/901 NBRP B. subtilis, Japan]
BKE14560 ([[gene|defB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGAAACTTCACTCCTAAA, downstream forward: _UP4_TAAAAGAGAAAACGGCTGGC
BKK14560 ([[gene|defB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGAAACTTCACTCCTAAA, downstream forward: _UP4_TAAAAGAGAAAACGGCTGGC
References