SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-12 18:05:34

locus

BSU09140

BSU_09140

ec

outlinks

bsu

BSU09140

BSU_09140

aminos

MLFNQRRGISPAALIIGSTMLITALSPQIRQRISGFITGQMNRRNSENNTFDASNVGNMVKQAFSGSSGSSGDNQDRSQHQSQRQNGRQHQHAGQQQPQHQHTQSQTRQTETAAKKRQPHYAEPIHFEQNAMNVMDDNTMMEMLEDLEPGR

[SW|Categories] containing this gene/protein

[SW|sporulation proteins], [SW|general stress proteins (controlled by SigB)]

Gene

Coordinates on the chromosome (coding sequence)

988,417 -> 988,872

Expression and Regulation

Operon

''yhcM'' [Pubmed|12480901]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigF]] [Pubmed|12480901,15699190], [[protein|SigG]] [Pubmed|15699190], [[protein|SigB]] [Pubmed|15805528]

Expression and Regulation

Regulation

induced by stress ([[protein|SigB]]) [Pubmed|15805528]

References

15805528, 12480901, 15699190

15805528, 12480901, 15699190, 30782632

proteinLength

151

geneLength

456

Gene

Coordinates

988,417 988,872

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Expression and Regulation

additional information

the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]

Biological materials

Mutant

MGNA-A670 (yhcM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/670 NBRP B. subtilis, Japan]

BKE09140 ([[gene|yhcM]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATCCCTCCTTTGCAGT, downstream forward: _UP4_TAAAAAAACGTGTAATCCTC

BKK09140 ([[gene|yhcM]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATCCCTCCTTTGCAGT, downstream forward: _UP4_TAAAAAAACGTGTAATCCTC