SubtiBank SubtiBank
Version comparison:

Wed Aug 31 2016 17:31:58 GMT+0200 (CEST)2025-05-11 12:33:59

description

similar to ABC transporter (ATP-binding protein)

similar to [SW|ABC transporter] (ATP-binding protein)

locus

BSU04490

BSU_04490

product

ABC transporter (ATP-binding protein)

[SW|ABC transporter] (ATP-binding protein)

ec

outlinks

bsu

BSU04490

BSU_04490

[SW|Categories] containing this gene/protein

[SW|ABC transporters], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

502,908 -> 503,834

The protein

Protein family

[SW|ABC transporter] domain (according to Swiss-Prot)

[SW|ABC transporter superfamily] (according to UniProt)

The protein

[SW|Interactions]

[[protein|YdbJ]]-[[protein|YdbK]] [Pubmed|10092453]

Expression and Regulation

Regulation

strongly repressed in response to glucose starvation in M9 medium [Pubmed|23033921]

References

10092453, 23033921

10092453, 23033921, 27120414

proteinLength

308

geneLength

927

Gene

Coordinates

502,908 503,834

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|ABC transporter domain] (aa 6-234) (according to UniProt)

The protein

Structure

[PDB|4YER] (from Thermotoga maritima, 32% identity)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

BKE04490 ([[gene|ydbJ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAGCCTTCCTCCTTTT, downstream forward: _UP4_GTCTAAATTAATTTGGAATG

BKK04490 ([[gene|ydbJ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAGCCTTCCTCCTTTT, downstream forward: _UP4_GTCTAAATTAATTTGGAATG