SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:37 GMT+0100 (CET)2025-03-13 17:44:09

locus

BSU37700

BSU_37700

ec

outlinks

bsu

BSU37700

BSU_37700

aminos

MKQLKPNSKYLLYGQALSFMGDYCVLPALLILSTYYHDYWVTSGVIVVRSIPMVFQPFLGVLVDRLDRIKIMLWTDIIRGIIFLGLTFLPKGEYPLIFLALLFITYGSGVFFNPARLAVMSSLESDIKSINTLFAKATTISIIVGAAAGGLFLLGGSVELAVAFNGVTYLVSAFFISRIKLQFVPIQSENIKEAFQSFKEGLKEIKTNSFVLNAMFTMITMALLWGVVYSYFPIVSRFLGDGEIGNFILTFCIGFGGFIGAALVSKWGFNNNRGLTYFTVLSIVSLALFLFTPIFAVSVIAAILFFIAMEYGEVLAKVKVQENAANQIQGRIFSVAEASIGLCISIGSMFINILSAPVIMGLIVVIVCGLFLHTKLVNKSFLERDNKTEQKGVF

[SW|Categories] containing this gene/protein

[SW|miscellaneous metabolic pathways], [SW|biosynthesis of antibacterial compounds], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

3,869,487 -> 3,870,671

The protein

Protein family

major facilitator superfamily (according to Swiss-Prot)

[SW|major facilitator superfamily] (according to UniProt)

Expression and Regulation

Operon

''[[protein|bacA]]-[[protein|bacB]]-[[protein|bacC]]-[[protein|bacD]]-[[protein|bacE]]-[[protein|bacF]]'' [Pubmed|12372825]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|19801406]

Expression and Regulation

Regulatory mechanism

[[protein|CodY]]: transcription repression [Pubmed|12372825,21709425]

[[protein|AbrB]]: transcription repression [Pubmed|12697329,21709425]

[[protein|ScoC]]: transcription repression [Pubmed|19801406]

proteinLength

394

geneLength

1185

Gene

Coordinates

3,869,487 3,870,671

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A513 (ywfF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/513 NBRP B. subtilis, Japan]

BKE37700 ([[gene|bacE]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE37700 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTAGAGTTGGGTTTCAGCT, downstream forward: _UP4_ACGGAGCAAAAAGGAGTCTT

BKK37700 ([[gene|bacE]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK37700 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTAGAGTTGGGTTTCAGCT, downstream forward: _UP4_ACGGAGCAAAAAGGAGTCTT