SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-16 03:55:27

locus

BSU06230

BSU_06230

ec

outlinks

bsu

BSU06230

BSU_06230

aminos

MNKQGNQMSFLRTIILVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNELMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALRVLKKIRDEKRAAAELQEIEFAFKKEDQLEKATFKDLSVPWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIGIFSLVLEGSPALPYVVLSLTVTFLAFQQGAISPVTWLMLSEIFPLRLRGLGMGVTVFCLWMVNFAVSFTFPILLAAIGLSTTFFIFVGLGICSVLFVKRFLPETKGLSLEQLEENFRAYDHSGAKKDSGAEVIG

[SW|Categories] containing this gene/protein

[SW|transporters/ other], [SW|utilization of specific carbon sources], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

676,442 -> 677,863

The protein

Protein family

View classification (according to Swiss-Prot)

[SW|major facilitator superfamily] (according to UniProt)

[SW|Sugar transporter (TC 2.A.1.1) family] (according to UniProt)

The protein

Paralogous protein(s)

[[protein|AraE]], [[protein|CsbC]], [[protein|IolT]], [[protein|YfiG]], [[protein|YncC]], [[protein|YwtG]]

[[this]]

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

cell membrane (according to UniProt)

Expression and Regulation

Regulation

induced in the presence of inositol ([[protein|IolR]]) [Pubmed|11807058]

Expression and Regulation

Regulatory mechanism

[[protein|IolR]]: transcription repression [Pubmed|11807058]

References

11807058, 20530884

11807058, 20530884, 28431560, 24127585

proteinLength

473

geneLength

1422

Gene

Coordinates

676,442 677,863

The protein

Structure

[PDB|4LDS] (glucose transporter from Staphylococcus epidermidis, 36% identity) [pubmed|24127585]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-C218 (ydjK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2216 NBRP B. subtilis, Japan]

BKE06230 ([[gene|iolT]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06230 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACTGTTTCCCCCAGTCT, downstream forward: _UP4_TAATTTAAAAAAGAATCCGC

BKK06230 ([[gene|iolT]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06230 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACTGTTTCCCCCAGTCT, downstream forward: _UP4_TAATTTAAAAAAGAATCCGC