Tue Dec 13 2016 11:16:37 GMT+0100 (CET)2025-05-10 20:16:55
locus
BSU40040
BSU_40040
outlinks
bsu
BSU40040
BSU_40040
aminos
MKIIIAPDSFKESLSALEAAEAIERGFKSVFPGADYRKLPVADGGEGTVQSLVDATNGRIIEQVVTGPLGEPVRAFFGMMGDGRTAVIEMAAASGLHLVPVDKRNPLITTTRGTGELIGAALDAGAERLIIGIGGSATNDGGAGMIQALGGRLLDNSGSEIGPGGGALSQLASIDVSGLDSRLRNVKLEVACDVDNPLTGPKGATAVFGPQKGATADMLDVLDQNVSHFADMAEKALGSTFRDTEGAGAAGGLGWSLLTYLQADLKRGIDIVLEAVDFESIVQDADLVITGEGRIDSQTVHGKTPIGVAKAAKSYDVPVIGIAGSISRDSNAVYQHGIDALFSIVPGAVPLEDAFEHAAEYMERTARDIAASIKLAKTMFLI
[SW|Categories] containing this gene/protein
[SW|poorly characterized/ putative enzymes]
Gene
Coordinates on the chromosome (coding sequence)
4,112,073 -> 4,113,221
The protein
Catalyzed reaction/ biological activity
ATP + (R)-glycerate = ADP + 3-phospho-(R)-glycerate (according to Swiss-Prot)
(R)-glycerate + ATP --> 3-phospho-D-glycerate + ADP + H+ (according to UniProt)
The protein
Protein family
glycerate kinase type-1 family (according to Swiss-Prot)
glycerate kinase type-1 family (single member, according to UniProt)
Expression and Regulation
Operon
''[[protein|yxaA]]-[[protein|yxaB]]'' [Pubmed|15805528,10746760][Pubmed|10746760]
Expression and Regulation
[SW|Sigma factor]
[[protein|SigA]] [Pubmed|15805528]
Expression and Regulation
Regulation
repressed during logrithmic growth ([[protein|AbrB]]) [Pubmed|15805528,18326573]
Expression and Regulation
Regulatory mechanism
[[protein|AbrB]]: transcription repression [Pubmed|15805528,18326573]
proteinLength
382
geneLength
1149
Gene
Coordinates
4,112,073 4,113,221
The protein
Paralogous protein(s)
[[this]]
The protein
Structure
[PDB|3CWC] (from Salmonella Typhimurium 58% identity)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-B680 (yxaA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1679 NBRP B. subtilis, Japan]
BKE40040 ([[gene|yxaA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCAAATCGCCTCTTTCA, downstream forward: _UP4_TAGCCGATGCACATGCCAAT
BKK40040 ([[gene|yxaA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCAAATCGCCTCTTTCA, downstream forward: _UP4_TAGCCGATGCACATGCCAAT