SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:35 GMT+0100 (CET)2025-05-28 11:10:23

locus

BSU29560

BSU_29560

ec

outlinks

bsu

BSU29560

BSU_29560

aminos

MLKREDLIAPVQYNLVNEMEKFSAAGQKTALLWEDESGKQESWSYEKLMEETNKIGAALADLGFKKGDKLIVMVPRVLEAYAVYLAILKSGMVVIPCSEMLRAKDLEYRIEHAEVKGAIVYSEFIGAFRDVSTADKLITLSIGENDAGWKNLLSIEADGSQFKTADTTRDDMAFLSYTSGTTGQPKGVVHTHGWAFAHLKTSAGAWLDISEKDIVWATAAPGWQKWVWSPFLAVLGSGATGFVYHGRFKAEKYLELLNRYKINVFCCTPTEYRLMAKVEGLKRFDLSALHSAVSAGEPLNREVIDVFQKHFGIKVRDGYGQTESTLLVGVLKDTPIKPGSMGKPTPGNQVEIINEDGEICKPGEVGDIAVHLSTPALFKEYFKDPERMKTQIRGDYFLTGDRARKDEEGYFWFESRNDDIIISSGYTIGPFEVEDALVKHPEVKECAVVASPDEIRGSIVKAYVVLQNHEKRSDELVKMLQNHVKTITAPYKYPREIEFVESLPKTASAKIRRVELRKREEQLKANKKA

[SW|Categories] containing this gene/protein

[SW|poorly characterized/ putative enzymes]

Gene

Coordinates on the chromosome (coding sequence)

3,023,677 -> 3,025,266

proteinLength

529

geneLength

1590

Gene

Coordinates

3,023,677 3,025,266

The protein

Protein family

[SW|ATP-dependent AMP-binding enzyme family] (according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|3ETC] (from Methanosarcina Acetivorans 37% identity)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A107 (ytcI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/107 NBRP B. subtilis, Japan]

BKE29560 ([[gene|ytcI]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCCTCACTTT, downstream forward: _UP4_GCGTAAAGAAAGAGAGTGAA

BKK29560 ([[gene|ytcI]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCCTCACTTT, downstream forward: _UP4_GCGTAAAGAAAGAGAGTGAA