SubtiBank SubtiBank
Version comparison:

2019-04-14 15:10:212025-05-14 01:35:29

locus

BSU16120

BSU_16120

essential

yes

quasi

outlinks

bsu

BSU16120

BSU_16120

Gene

Phenotypes of a mutant

essential [Pubmed|25092907], non-essential according to [Pubmed|28189581], but only one resistance cassette was possible

essential [Pubmed|25092907]

non-essential according to [Pubmed|28189581], but only one resistance cassette was possible

essential, deletion of [[gene|topA]] results in the immediate acquisition of suppressor mutations that result in overexpression of [[protein|ParE]]-[[protein|ParC]] [pubmed|30957856]

The protein

Catalyzed reaction/ biological activity

relaxation of negatively supercoiled DNA

relaxation of negatively supercoiled DNA

ATP-independent breakage of single-stranded DNA, followed by passage and rejoining (according to UniProt)

Biological materials

Mutant

BKK16120 ([[gene|topA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK16120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCCCCCTCAAGA, downstream forward: _UP4_TAGCGGTGAGCAGGGTCTTG

BKK16120 (Δ[[gene|topA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK16120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCCCCCTCAAGA, downstream forward: _UP4_TAGCGGTGAGCAGGGTCTTG

GP1963 (Δ[[gene|topA]]::aphA3 (citB-alsT)16) [pubmed|30957856]

References

Original publications

17114254, 21710567, 25092907, 16600296, 27378778, 9722641, 28189581, 28414321, 21710567, 29242163, 26490962, 25232096, 23514156, 22923519, 10713132, 12167668, 30222737

17114254, 21710567, 25092907, 16600296, 27378778, 9722641, 28189581, 28414321, 21710567, 29242163, 26490962, 25232096, 23514156, 22923519, 10713132, 12167668, 30222737, 30957856, 30478267, 32232337