Tue Dec 13 2016 11:16:34 GMT+0100 (CET)2025-05-30 02:40:27
title
yprB
mrfB
description
unknown
metal-dependent exonuclease, part of a novel nucleotide excision repair pathway
locus
BSU22210
BSU_22210
function
unknown
mitomycin C-specific DNA damage repair
product
unknown
metal-dependent exonuclease
ec
names
yprB
mrfB
yprB
outlinks
bsu
BSU22210
BSU_22210
aminos
MSLKGKLQRMKKHMALDEGEQKIEAGKQENHFDDIPFLEEWEAFGMKPFIFEDEYCLIREVEYPLSHRHGLYSFSELEEVITLWNQSGLSHTLSAKGYNKNNLFFFDTETTGLGGGAGNTIFLLGHARVYEDRVTVKQHLLPKPGNEVALYQSFLSEVDITSLVTYNGKAFDWPQVKTRHTLIRDRLPKLPEFGHFDLLHGARRLWKHKMDRVSLGTVEKEELGIRRLEDTPGYLAPMLYFHFIKAQEPDLLKGVLHHNEMDVLSLISLYIHMSKKILSESHAPKEHSEAYAMAKWFMAHKETDQAIKQLERLIEKSFEDQDSARLDLSLLYKKQNRLEEAVPLWEKLSRSQNQKCRYAAVIELAKYFEHKKKEFGKALQVAEQSLSDAACLSEKETEKLHVRIARLKRKYSS
[SW|Categories] containing this gene/protein
[SW|proteins of unknown function]
Gene
Coordinates on the chromosome (coding sequence)
2,333,324 -> 2,334,565
The protein
Protein family
Aspartase subfamily (according to Swiss-Prot)
proteinLength
413
geneLength
1242
Gene
Coordinates
2,333,324 2,334,565
Gene
Phenotypes of a mutant
sensitive to mitomycin C [pubmed|30379365]
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Cofactors]
Mg2+ [pubmed|30379365]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-A413 (yprB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/413 NBRP B. subtilis, Japan]
BKE22210 ([[gene|mrfB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAATGACATATCCGGCCTCC, downstream forward: _UP4_TAAATATTCCCCGGGAAAGC
BKK22210 ([[gene|mrfB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAATGACATATCCGGCCTCC, downstream forward: _UP4_TAAATATTCCCCGGGAAAGC
References
Research papers