SubtiBank SubtiBank
Version comparison:

2018-02-10T13:42:37.000Z2025-05-25 06:10:31

locus

BSU15720

BSU_15720

geneLength

480

483

outlinks

bsu

BSU15720

BSU_15720

Gene

Coordinates

1,646,512 → 1,646,994

1,646,512 1,646,994

The protein

Catalyzed reaction/ biological activity

Formyl-L-methionyl peptide + H2O = formate + methionyl peptide (according to Swiss-Prot)

H2O + N-terminal N-formyl-L-methionyl-[peptide] --> formate + N-terminal L-methionyl-[peptide] (according to UniProt)

The protein

Protein family

polypeptide deformylase family (according to Swiss-Prot)

polypeptide deformylase family (with [[protein|DefB]], according to UniProt)

The protein

Paralogous protein(s)

[[protein|DefB]]

[[this]]

Biological materials

Mutant

BKE15720 (Δ[[gene|defA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTTGTTACCCTCCAAGA, downstream forward: _UP4_CTAGCGGATATGGAAGGATG

BKK15720 (Δ[[gene|defA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTTGTTACCCTCCAAGA, downstream forward: _UP4_CTAGCGGATATGGAAGGATG

BKE15720 ([[gene|defA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTTGTTACCCTCCAAGA, downstream forward: _UP4_CTAGCGGATATGGAAGGATG

BKK15720 ([[gene|defA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTTGTTACCCTCCAAGA, downstream forward: _UP4_CTAGCGGATATGGAAGGATG

References

11429456, 12627383, 18288106, 16964327, 23770820, 27983482

11429456, 12627383, 18288106, 16964327, 23770820, 27983482, 16049914

The protein

Structure

[PDB|1WS0] (from B.cereus, 67% identity) [pubmed|16049914]