Mon Aug 31 2015 13:52:26 GMT+0200 (CEST)2025-05-16 08:22:37
description
similar to transcriptional regulator (MocR/ GabR family)
similar to transcriptional regulator ([SW|MocR/ GabR family])
locus
BSU03560
BSU_03560
ec
outlinks
bsu
BSU03560
BSU_03560
syns
[SW|Categories] containing this gene/protein
[SW|transcription factors and their control]
The protein
Protein family
[[MocR/ GabR family]] [Pubmed|22020104]
[SW|MocR/ GabR family] [Pubmed|22020104]
[SW|class-I pyridoxal-phosphate-dependent aminotransferase family] (according to UniProt)
The protein
Paralogous protein(s)
none, but there are 7 members of the [[MocR/ GabR family]] in ''B. subtilis
[[this]]
The protein
[SW|Domains]
N-terminal DNA-binding helix-turn-helix motif; C-terminal domain is homologous to PLP-binding large domain of aminotransferases.
N-terminal DNA-binding helix-turn-helix motif; C-terminal domain is homologous to PLP-binding large domain of aminotransferases.
[SW|HTH gntR-type domain] (aa 1-69) (according to UniProt)
References
proteinLength
444
geneLength
1335
Gene
Coordinates
406,131 407,465
The protein
[SW|Cofactors]
PLP
The protein
Structure
[PDB|4MGR] ([[protein|GabR]], 27% identity) [pubmed|24127574]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
BKE03560 ([[gene|ycxD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE03560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCCTTCTCCCCCTGTTT, downstream forward: _UP4_GGTGTCAAGCTGTTGATGAG
BKK03560 ([[gene|ycxD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK03560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCCTTCTCCCCCTGTTT, downstream forward: _UP4_GGTGTCAAGCTGTTGATGAG