SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:34 GMT+0100 (CET)2025-05-15 20:35:29

locus

BSU22520

BSU_22520

ec

outlinks

bsu

BSU22520

BSU_22520

aminos

MKRKLTICLLIALIFYNGNAKAAERGSLEELNDLSDTVFQMTRQAKYEEALQVLEYFEKTLKSAEKKQQDPMLTGAQIRQITLGYNDMVRSLKQADTSDTQKLRAAAQFRMLMDAVDNRSDPLWGSLEKPIMEAFTELKRDVQKNGSTSFHEKWNEFISLYDLIYPSLTIDVSEDQLETVGKHIDVIEQEEFQQMTESTKLERLSLLQHDLKNVFDRVEEDDADPSLLWVIITTGSIIITALTYVGYRKYKAEKNKLKKRDYPK

[SW|Categories] containing this gene/protein

[SW|sporulation proteins], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

2,361,544 -> 2,362,338

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

membrane (according to UniProt)

Expression and Regulation

Operon

'''ypjB''' [Pubmed|8760912]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigE]] [Pubmed|15699190,12662922]

Expression and Regulation

Regulation

expressed earlyduring sporulation in the mother cell ([[protein|SigE]], [SW|SpoIIID]) [Pubmed|15699190,12662922,15383836]

Expression and Regulation

Regulatory mechanism

[SW|SpoIIID]: transcription repression [Pubmed|15383836]

proteinLength

264

geneLength

795

Gene

Coordinates

2,361,544 2,362,338

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A405 (ypjB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/405 NBRP B. subtilis, Japan]

BKE22520 ([[gene|ypjB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCAGGTCCCTCCCACTC, downstream forward: _UP4_TAAGGATGAGGGGCGGCGGT

BKK22520 ([[gene|ypjB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22520 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCAGGTCCCTCCCACTC, downstream forward: _UP4_TAAGGATGAGGGGCGGCGGT