Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-11 09:33:40
description
Putative polysaccharide deacetylase
putative polysaccharide deacetylase
locus
BSU09660
BSU_09660
ec
outlinks
bsu
BSU09660
BSU_09660
aminos
MRQTRGEASPSAVSLAFKFASLAVLCVLLLLMVILGYSNSSTKAKEVTVTTNGQLRDEKESLKLKNDSPDLLIKHLQTKQNMGDKTVYLTFDDGPSAVTTRLLDVLKSADVKATFFMLSPRMNEFKQAVKRAEKEGHALGLHGVTHNNRLFYQTPTSPLKEMQEARDTLQDITGYKTDLVRTPYGSKPSLTASQIRNLEKDGFVYWDWTIDSMDWKYRNSQYVTAVLQQLENMEHSSSSRPNVILMHDLPATVNALPVLINKLKEKGYSFGVLEDTMVPVHE
[SW|Categories] containing this gene/protein
[SW|poorly characterized/ putative enzymes]
Gene
Coordinates on the chromosome (coding sequence)
1,040,861 -> 1,041,709
proteinLength
282
geneLength
849
Gene
Coordinates
1,040,861 1,041,709
The protein
Protein family
[SW|polysaccharide deacetylase family] (according to UniProt)
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
NodB homology domain (aa 85-271) (according to UniProt)
The protein
Structure
[PDB|2C1G] (the NodB domain, from Streptococcus pneumoniae, 37% identity) [pubmed|16221761]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-A708 (yheN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/708 NBRP B. subtilis, Japan]
BKE09660 ([[gene|yheN]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAACAATCTCTCCATTGG, downstream forward: _UP4_TAAAAAAGTGAGGCGCATAA
BKK09660 ([[gene|yheN]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAACAATCTCTCCATTGG, downstream forward: _UP4_TAAAAAAGTGAGGCGCATAA
References
Research papers