SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:37 GMT+0100 (CET)2025-05-23 17:22:25

locus

BSU38080

BSU_38080

outlinks

bsu

BSU38080

BSU_38080

aminos

MKRLLVSLRVWMVFLMNWVTPDRKTAAAAVYSAQRTYQRKAAVQAAGLVSFYEWRMAVNEEEKQKAKAAALYKRRCLQAFKESPKQERAGPHLYMAVKRR

[SW|Categories] containing this gene/protein

[SW|proteins of unknown function], [SW|sporulation proteins]

Gene

Coordinates on the chromosome (coding sequence)

3,907,012 -> 3,907,314

Expression and Regulation

Operon

''[[protein|ywcI]]-[[protein|sacT]]'' [Pubmed|22383849]

Expression and Regulation

Regulation

repressed by casamino acids [Pubmed|12107147]

Expression and Regulation

Regulatory mechanism

[[protein|DnaA]]: transcription repression [Pubmed|26020636]

Expression and Regulation

Additional information

the mRNA is substantially stabilized upon depletion of [[Rny|RNase Y]] [PubMed|21815947]

proteinLength

100

geneLength

303

Gene

Coordinates

3,907,012 3,907,314

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B673 (ywcI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1672 NBRP B. subtilis, Japan]

BKE38080 ([[gene|ywcI]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE38080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGAAAAACATCCCTCCG, downstream forward: _UP4_TAAAATCCCAGTCAAAAGCA

BKK38080 ([[gene|ywcI]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK38080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGAAAAACATCCCTCCG, downstream forward: _UP4_TAAAATCCCAGTCAAAAGCA