Tue Dec 13 2016 11:16:37 GMT+0100 (CET)2025-05-22 14:37:59
description
D-Tyr resistance regulator (MarR family)
D-Tyr resistance regulator ([SW|MarR family])
locus
BSU38450
BSU_38450
product
transcription factor (MarR family)
transcription factor ([SW|MarR family])
ec
outlinks
bsu
BSU38450
BSU_38450
aminos
MERSHQHQQLRKEEHDTLSKLKQMPVESLNLEAISIATNLYRSAQRLRVKMETEVLSTYNLSWTAFSILYDLWVWGALETRKIAELSGISTATASNVIKTLEKKSFCRKSIDTRDRRLVFVSITDSGKQAIEELYPEFHKGETELIAGMTKDEQKILTGLLRKVADNLHTT
[SW|Categories] containing this gene/protein
[SW|transcription factors and their control]
Gene
Coordinates on the chromosome (coding sequence)
3,946,394 -> 3,946,909
The protein
Catalyzed reaction/ biological activity
repression of the ''[[protein|dtrR]]-[[protein|tyrZ]]'' operon [Pubmed|25733610]
repression of the ''[[gene|dtrR]]-[[gene|tyrZ]]'' operon [Pubmed|25733610]
Expression and Regulation
Operon
''[[protein|dtrR]]-[[protein|tyrZ]]'' [Pubmed|25733610]
Expression and Regulation
Regulation
[[protein|DtrR]]: transcriptional repression [Pubmed|25733610]
proteinLength
171
geneLength
516
Gene
Coordinates
3,946,394 3,946,909
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|HTH marR-type domain] (aa 33-166) (according to UniProt)
The protein
Structure
[PDB|3CDH] (from Silicibacter pomeroyi, 24% identity)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-B219 (ywaE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1218 NBRP B. subtilis, Japan]
BKE38450 ([[gene|dtrR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE38450 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTTTAGGCCTGCCTTA, downstream forward: _UP4_GCTGACAATCTTCATACAAC
BKK38450 ([[gene|dtrR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK38450 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTTTAGGCCTGCCTTA, downstream forward: _UP4_GCTGACAATCTTCATACAAC