SubtiBank SubtiBank
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Tue Dec 13 2016 11:16:35 GMT+0100 (CET)2025-05-25 10:52:05

description

MarR/DUF24 family transcription regulator

[SW|MarR family|MarR/DUF24 family] transcription regulator

locus

BSU29030

BSU_29030

product

MarR/DUF24 family transcription regulator

[SW|MarR family|MarR/DUF24 family] transcription regulator

ec

outlinks

bsu

BSU29030

BSU_29030

aminos

MEKKKYNISVEATLEVIGGKWKCVILCHLTHGKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLEGILDMLCAWGANHINRVYGDTFSVLEESVLNDKLKQES

[SW|Categories] containing this gene/protein

[SW|transcription factors and their control]

Gene

Coordinates on the chromosome (coding sequence)

2,968,260 -> 2,968,640

The protein

Protein family

[[MarR/DUF24 family]]

[SW|MarR family|MarR/DUF24 family]

proteinLength

126

geneLength

381

Gene

Coordinates

2,968,260 2,968,640

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|HTH hxlR-type domain] (aa 8-106) (according to UniProt)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A120 (ytcD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/120 NBRP B. subtilis, Japan]

BKE29030 ([[gene|ytcD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAATCCATTCTCCTCA, downstream forward: _UP4_TAAAGCATGAGGGCAGTCAG

BKK29030 ([[gene|ytcD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAATCCATTCTCCTCA, downstream forward: _UP4_TAAAGCATGAGGGCAGTCAG