2018-05-28 07:20:182025-05-29 19:23:35
description
transcription regulator of the glucarate/galactarate utilization operon (GntR family)
transcription regulator of the glucarate/galactarate utilization operon ([SW|GntR family])
locus
BSU02500
BSU_02500
geneLength
699
702
product
transcription regulator (GntR family)
transcription regulator ([SW|GntR family])
ec
outlinks
bsu
BSU02500
BSU_02500
Gene
Coordinates
273,237 → 273,938
273,237 273,938
Biological materials
Mutant
MGNA-C030 (ycbG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2028 NBRP B. subtilis, Japan]
BKE02500 (Δ[[gene|ycbG]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCTCCCTTCA, downstream forward: _UP4_TAATGGTGAGCAACCGCAGT
BKK02500 (Δ[[gene|ycbG]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCTCCCTTCA, downstream forward: _UP4_TAATGGTGAGCAACCGCAGT
MGNA-C030 (ycbG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2028 NBRP B. subtilis, Japan]
BKE02500 ([[gene|ycbG]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCTCCCTTCA, downstream forward: _UP4_TAATGGTGAGCAACCGCAGT
BKK02500 ([[gene|ycbG]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCTCCCTTCA, downstream forward: _UP4_TAATGGTGAGCAACCGCAGT
References
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|HTH gntR-type domain] (aa 16–84) (according to UniProt)
The protein
Structure
[PDB|2DI3] (from Corynebacterium glutamicum, corresponds to aa 20 ... 178, 32.7% identity) [pubmed|18988622]