Tue Dec 13 2016 11:16:30 GMT+0100 (CET)2025-06-01 00:29:57
title
ybeC
aimA
description
similar to amino acid transporter
amino acid importer
locus
BSU02120
BSU_02120
function
unknown
uptake of serine
product
unknown
amino acid importer A
ec
names
ybeC
aimA
ybeC
outlinks
bsu
BSU02120
BSU_02120
aminos
MNQLHRRMGTFSLMMVGLGSMIGSGWLFGAWRAAQIAGPAAIISWVIGMVVILFIALSYSELGSMFPEAGGMVKYTQYSHGSFIGFIAGWANWIAIVSVIPVEAVASVQYMSSWPWEWAKWTSGLVKNGTLTGEGLAFASVLLLIYFLLNYWTVNLFSKANSLITIFKIIIPGLTIGALLFVGFHGENFTGGQSIAPNGWASVLTAVATSGIVFAFNGFQSPINMAGEAKNPGKSIPIAVVGSLFVATVIYVLLQIAFIGAVNPSDIAHGWSHLNFNSPFADLAIALNINWLVIVLYADAFVSPSGTGITYTATTSRMIYGMEKNKYMPSIFGKLHPIYGVPRQAMFFNLIVSFIFLFLFRGWGVLAEIISVATLISYITGPITVMTLRRTGKDLYRPLRLKGLNVIAPLGFIFASLVLYWARWPLTGQVLFIILIGLPIYFYYQAKAKWKGFGRNFKAGVWMVFYLLAMMVISYLGSDKFGGLNVIHYGWDMVLIAMVSLVFYVWALKSGYQTEYLKDAKEINSQLLNGQSEAAAGKE
[SW|Categories] containing this gene/protein
[SW|transporters/ other], [SW|membrane proteins]
Gene
Coordinates on the chromosome (coding sequence)
231,348 -> 232,967
The protein
Paralogous protein(s)
[[protein|YveA]]
[[this]]
The protein
[SW|Localization]
membrane associated [Pubmed|18763711]
membrane [Pubmed|18763711]
References
proteinLength
539
geneLength
1620
Gene
Coordinates
231,348 232,967
Gene
Phenotypes of a mutant
resistant to serine [pubmed|32743959]
The protein
Catalyzed reaction/ biological activity
uptake of serine [pubmed|32743959]
The protein
Protein family
[SW|amino acid-polyamine-organocation (APC) superfamily] (according to UniProt)
The protein
Structure
[PDB|6F2G] from Carnobacterium sp. AT7, 24.8% identity [pubmed|31000719]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
GP1886 Δ[[gene|aimA]]::cat, available in [SW|Jörg Stülke]'s lab [pubmed|32743959]
GP2786 Δ[[gene|aimA]]::aphA3, available in [SW|Jörg Stülke]'s lab [pubmed|32743959]
MGNA-B963 (ybeC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1962 NBRP B. subtilis, Japan]
BKE02120 ([[gene|aimA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCGTAAACACCTTTCA, downstream forward: _UP4_TAAAATATAGAAGAAAACCT
BKK02120 ([[gene|aimA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCGTAAACACCTTTCA, downstream forward: _UP4_TAAAATATAGAAGAAAACCT
GP2831 (''Δ''''[[gene|gltT]]''::''aphA3'' ''Δ''''[[gene|aimA]]''::''phleo''), available in [SW|Jörg Stülke]'s lab
Biological materials
lacZ fusion
pGP2287 (in [SW|pAC5]) (GP2965), available in [SW|Jörg Stülke]'s lab [pubmed|32743959]
Biological materials
FLAG-tag construct
GP3062 ''ybeC-3xFLAG spc'' (based on [SW|pGP1331]), available in [SW|Jörg Stülke]'s lab