SubtiBank SubtiBank
Version comparison:

2018-11-23 15:39:222025-05-22 17:35:12

locus

BSU21990

BSU_21990

geneLength

396

399

outlinks

bsu

BSU21990

BSU_21990

Gene

Coordinates

2,310,419 → 2,310,817

2,310,419 2,310,817

Biological materials

Mutant

MGNA-A871 (ypdQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/871 NBRP B. subtilis, Japan]

BKE21990 (Δ[[gene|ypdQ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCTACATATATTTCTGTAG, downstream forward: _UP4_TAAATCTTGATCATTGGTTC

BKK21990 (Δ[[gene|ypdQ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCTACATATATTTCTGTAG, downstream forward: _UP4_TAAATCTTGATCATTGGTTC

MGNA-A871 (ypdQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/871 NBRP B. subtilis, Japan]

BKE21990 ([[gene|ypdQ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCTACATATATTTCTGTAG, downstream forward: _UP4_TAAATCTTGATCATTGGTTC

BKK21990 ([[gene|ypdQ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCTACATATATTTCTGTAG, downstream forward: _UP4_TAAATCTTGATCATTGGTTC

References

22383849, 29084857

22383849, 29084857, 8393706

The protein

Protein family

RNase H family (single member, according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

RNase H domain (aa 1-127) (according to UniProt)

The protein

Structure

[PDB|1GOC] (RNase HI from E. coli, 30% identity) [pubmed|8393706]