2018-09-06 18:42:232025-05-15 18:35:31

locus

BSU05240

BSU_05240

geneLength

1389

1392

outlinks

bsu

BSU05240

BSU_05240

Gene

Coordinates

571,389 → 572,780

571,389 572,780

The protein

Protein family

[SW|MocR/ GabR family ][Pubmed|22020104]

[SW|class-I pyridoxal-phosphate-dependent aminotransferase family] (according to UniProt)

The protein

[SW|Domains]

N-terminal DNA-binding helix-turn-helix motif; C-terminal domain is homologous to PLP-binding large domain of aminotransferases.

[SW|HTH gntR-type domain] (aa 13-81) (according to UniProt)

Biological materials

Mutant

MGNA-C083 (ydeL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2081 NBRP B. subtilis, Japan]

BKE05240 (Δ[[gene|ydeL]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGCGCGTTGTTCTCCT, downstream forward: _UP4_TGAGGGAGCTTTCAGTTTAG

BKK05240 (Δ[[gene|ydeL]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGCGCGTTGTTCTCCT, downstream forward: _UP4_TGAGGGAGCTTTCAGTTTAG

MGNA-C083 (ydeL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2081 NBRP B. subtilis, Japan]

BKE05240 ([[gene|ydeL]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGCGCGTTGTTCTCCT, downstream forward: _UP4_TGAGGGAGCTTTCAGTTTAG

BKK05240 ([[gene|ydeL]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGCGCGTTGTTCTCCT, downstream forward: _UP4_TGAGGGAGCTTTCAGTTTAG

The protein

[SW|Cofactors]

PLP