2017-12-29 12:33:292025-05-12 09:54:13
locus
BSU09620
BSU_09620
geneLength
729
732
ec
outlinks
bsu
BSU09620
BSU_09620
Gene
Coordinates
1,037,688 → 1,038,419
1,037,688 1,038,419
The protein
Paralogous protein(s)
[[protein|GlpQ]], [[protein|YqiK]]
[[this]]
Biological materials
Mutant
MGNA-B487 (yhdW::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1486 NBRP B. subtilis, Japan]
BKE09620 (Δ[[gene|yhdW]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09620 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGCTAAGTCAGCTCCTCG, downstream forward: _UP4_GATTTCATCATAAAGGATGG
BKK09620 (Δ[[gene|yhdW]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09620 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGCTAAGTCAGCTCCTCG, downstream forward: _UP4_GATTTCATCATAAAGGATGG
MGNA-B487 (yhdW::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1486 NBRP B. subtilis, Japan]
BKE09620 ([[gene|yhdW]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09620 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGCTAAGTCAGCTCCTCG, downstream forward: _UP4_GATTTCATCATAAAGGATGG
BKK09620 ([[gene|yhdW]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09620 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGCTAAGTCAGCTCCTCG, downstream forward: _UP4_GATTTCATCATAAAGGATGG
The protein
Catalyzed reaction/ biological activity
sn-glycero-3-phosphoester + H2O --> alcohol + H+ + sn-glycerol 3-phosphate (according to UniProt)
The protein
Protein family
glycerophosphoryl diester phosphodiesterase family (with [[protein|GlpQ]], according to UniProt)
The protein
[SW|Domains]
GP-PDE domain (aa 1-238) (according to UniProt)
The protein
Structure
[PDB|5T9B] ([[protein|GlpQ]], 38% identity) [pubmed|27780866]
References
Research papers