2017-8-11 16:0:32025-05-29 10:54:22
description
RNase R, required for protection against paraquat stress
RNase R, required for protection against paraquate stress
locus
BSU33610
BSU_33610
geneLength
2337
2340
ec
outlinks
bsu
BSU33610
BSU_33610
Gene
Coordinates
3,451,863 → 3,454,202
3,451,863 3,454,202
The protein
Catalyzed reaction/ biological activity
3'-5'-exoribonuclease
3'-5'-exoribonuclease
Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates (according to UniProt)
The protein
Protein family
ribonuclease II (RNB) family (according to Swiss-Prot)
RNR ribonuclease family (single member, according to UniProt)
Biological materials
Mutant
MGNA-A495 (yvaJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/495 NBRP B. subtilis, Japan]
MGNA-A495 (yvaJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/495 NBRP B. subtilis, Japan]
BKE33610 ([[gene|rnr]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33610 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCCATTATCCGACCTCCTG, downstream forward: _UP4_TAGCAGCTCAACCAGCAAAT
BKK33610 ([[gene|rnr]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33610 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCCATTATCCGACCTCCTG, downstream forward: _UP4_TAGCAGCTCAACCAGCAAAT
Labs working on this gene/protein
[SW|David Bechhofer], Mount Sinai School, New York, USA [http://www.mountsinai.org/Research/Centers%20Laboratories%20and%20Programs/Bechhofer%20Laboratory?citype=Physician&ciid=Bechhofer%20David%20H%201255565 Homepage]
References
Reviews
References
Original publications
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|S1 domain] (aa 628-708) (according to UniProt)
2 [SW|CSD domain]s (aa 73-133, aa 138-202) (according to the Interpro database)
The protein
Structure
[PDB|5XGU] (from E. coli, 40% identity) [pubmed|29036353]
labs
[SW|David Bechhofer], Mount Sinai School, New York, USA [http://www.mountsinai.org/Research/Centers%20Laboratories%20and%20Programs/Bechhofer%20Laboratory?citype=Physician&ciid=Bechhofer%20David%20H%201255565 Homepage]