SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:37 GMT+0100 (CET)2025-05-23 00:39:02

locus

BSU39050

BSU_39050

ec

outlinks

bsu

BSU39050

BSU_39050

aminos

MSDDQNKRVNEHSKDEQLEQYRTDNSGKKMTTNQGLRVSEDEHSLKAGVRGPTLMEDFHFREKMTHFDHERIPERVVHARGFGVHGFFQVYEPMTEYTRAKFLQDPSVKTPVFVRFSTVAGSKGSADTVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHAFKPEPHNEMPQAATAHDTFWDFVANNPESAHMVMWTMSDRGIPRSYRMMEGFGVHTFRFVNEQGKARFVKFHWKPVLGVHSLVWDEAQKIAGKDPDFHRRDLWETIENGGKVEYELGVQMIDEEDEFKFDFDILDPTKLWPEELVPVKIIGKMTLNRNQDNVFAETEQVAFHPGNVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHEIPINRPVCPFHNNQYDGYHRMTINKGPVAYHKNSLQNNDPSPATAEEGGYVHYQEKVEGKKIRQRSDSFNDYYSQAKLFWNSMSPVEKQHIISAFCFEVGKVKSKDVQRQVVDVFSNVDADLAEEIAKGVGVAAPAKRKASKEILTSPALSQARTVKTASTRKVAVLAGNGFHEKELQTVLEALKQEGITVDIISQNLGYMTSGSGQQLEASGTFLTVDSVLYDAVYAAGGLELKDNKQAMAFIREAYNHYKAIGAANEGIDLLQSSVGTTEGLGIVTAKDEPDYTAFSKAFIDAVAAHRHWDRRI

[SW|Categories] containing this gene/protein

[SW|general stress proteins (controlled by SigB)], [SW|resistance against oxidative and electrophile stress]

Gene

Coordinates on the chromosome (coding sequence)

4,008,143 -> 4,010,203

The protein

Catalyzed reaction/ biological activity

2 H2O2 = O2 + 2 H2O (according to Swiss-Prot)

2 H2O2 --> O2 + 2 H2O (according to UniProt)

The protein

Protein family

HPII subfamily (according to Swiss-Prot)

[SW|catalase family] (according to UniProt)

Expression and Regulation

Operon

''[[protein|katE]]-[[protein|yxiS]]'' [Pubmed|10746760]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigB]] [Pubmed|7559348]

Expression and Regulation

Regulation

induced by stress ([[protein|SigB]]) [Pubmed|11544224]

References

9393707, 7559348, 16672620, 8931328, 11544224, 7559348

9393707, 7559348, 16672620, 8931328, 11544224, 7663946

proteinLength

686

geneLength

2061

Gene

Coordinates

4,008,143 4,010,203

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|1IPH] (from E. coli, 53% identity) [pubmed|7663946]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B724 (katE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1723 NBRP B. subtilis, Japan]

BKE39050 ([[gene|katE]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE39050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTGCTCCCCCTTTTT, downstream forward: _UP4_TGATCGGCTCCTGTATCTTT

BKK39050 ([[gene|katE]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK39050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTGCTCCCCCTTTTT, downstream forward: _UP4_TGATCGGCTCCTGTATCTTT