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rplC [Fri Jan 29 2016 16:45:49 GMT+0100 (CET)]
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rplC [Fri Jan 29 2016 16:45:49 GMT+0100 (CET)]

ribosomal protein L3
locus
BSU01160
pI
10.00
mw
22.00 kDa
function
translation
product
ribosomal protein L3 (BL3)
essential
yes
synonyms

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.4|Ribosomal proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.1|Essential genes]
  • [category|SW 6|Groups of genes] → [category|SW 6.5|Universally conserved proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|translation], [SW|essential genes], [SW|universally conserved proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|stringent response]
  • Gene

    Coordinates on the chromosome (coding sequence)
    135,712 -> 136,341

    Phenotypes of a mutant

  • essential [Pubmed|23002217,12682299]
  • The protein

    Catalyzed reaction/ biological activity

  • [protein|search|RplC] binding to the precursor 23S rRNA stimulates [protein|search|MrnC] activity [Pubmed|19154332]
  • Protein family

  • [SW|ribosomal protein] L3P family (according to Swiss-Prot)
  • [SW|Localization]

  • located at the peptidyl transferase center of the 50S ribosomal subunit [Pubmed|23759864]
  • [SW|Interactions]

  • [protein|search|YsxC]-[protein|search|RplC] [Pubmed|17981968]
  • [protein|search|RplC]-[protein|search|CshA] [Pubmed|23175651]
  • Expression and Regulation

    Operon

  • ''[protein|search|rpsJ]-[protein|search|rplC]-[protein|search|rplD]-[protein|search|rplW]-[protein|search|rplB]-[protein|search|rpsS]-[protein|search|rplV]-[protein|search|rpsC]-[protein|search|rplP]-[protein|search|rpmC]-[protein|search|rpsQ]-[protein|search|rplN]-[protein|search|rplX]-[protein|search|rplE]-[protein|search|rpsN]-[protein|search|rpsH]-[protein|search|rplF]-[protein|search|rplR]-[protein|search|rpsE]-[protein|search|rpmD]-[protein|search|rplO]'' [Pubmed|9371452]
  • [SW|Sigma factor]

  • [protein|search|SigA] two promoters, about 140bp and 200bp upstream of the start codon [Pubmed|9371452]
  • Regulation

  • [protein|search|RelA] dependent downregulation (Class I) during stringent response [Pubmed|11948165]
  • Biological materials

    two-hybrid system

  • B. pertussis adenylate cyclase-based bacterial two hybrid system ([SW|BACTH]), available in [SW|Stülke] lab
  • References

  • 17981968,9371452,19154332,19653700,11948165,8635744,23175651,23759864,23002217