ycbN

similar to [SW|ABC transporter] (ATP-binding protein)

locus: BSU_02570

pI: 8.51

mw: 31.54 kDa

protein length: 307 aa

gene length: 924 bp

function: unknown

product: [SW|ABC transporter] (ATP-binding protein)

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]

Gene

Coordinates: 280,086 → 281,009

The protein

Protein family

• [SW|ABC transporter superfamily] (according to UniProt)

[SW|Domains]

• [SW|ABC transporter domain] (aa 5-233) (according to UniProt)

Structure

• [PDB|4YER] (from Thermotoga maritima, corresponds to aa 4 ... 212, 40% identity)

Expression and Regulation

Operons

• genes: [gene|60DA46B02BB5F71337AF5F34921E2E68EC062EC7|ycbL]-[gene|348F81B6ECB6FFBEC092A672FF5F40FE86918872|ycbM]-[gene|FE7AC936BE959D745FBB6A88EAD64408C7177125|ycbN]-[gene|621FA6E2A76BB74F9051FBDB6857ED56F65BAB15|ycbO]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-C036 (ycbN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2034 NBRP B. subtilis, Japan]
• BKE02570 (Δ[gene|FE7AC936BE959D745FBB6A88EAD64408C7177125|ycbN]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACTTTGTTTCTCCTTCCC, downstream forward: _UP4_GCGTAAAGGAGGAGAGACAC
• BKK02570 (Δ[gene|FE7AC936BE959D745FBB6A88EAD64408C7177125|ycbN]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACTTTGTTTCTCCTTCCC, downstream forward: _UP4_GCGTAAAGGAGGAGAGACAC

References

• 10092453