yvdS

similar to multidrug-efflux transporter

locus: BSU_34490

pI: 8.65

mw: 11.95 kDa

protein length: 111 aa

gene length: 336 bp

function: unknown

product: subunit of unidentified multidrug transporter

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.14|Multidrug exporters]
• [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.3|Chaperone/ protein folding/ based on similarity]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,541,488 → 3,541,823

The protein

Protein family

• paired small multidrug resistance protein family ([SW|PSMR family]) [Pubmed|17942072]
• [SW|drug/metabolite transporter (DMT) superfamily] (according to UniProt)
• [SW|Small multidrug resistance (SMR) (TC 2.A.7.1) family] (according to UniProt)

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|8417C205E756C27D25BCEA9394DEB0968B5F4F7B|yvdT]-[gene|FDE9E1E86BA06B4CE782CBA32F113D302A0B2231|yvdS]-[gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B617 (yvdS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1616 NBRP B. subtilis, Japan]
• BKE34490 (Δ[gene|FDE9E1E86BA06B4CE782CBA32F113D302A0B2231|yvdS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATGAAACACCTCTCTAT, downstream forward: _UP4_TCTCAGCCGGGAGGTGAAAA
• BKK34490 (Δ[gene|FDE9E1E86BA06B4CE782CBA32F113D302A0B2231|yvdS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATGAAACACCTCTCTAT, downstream forward: _UP4_TCTCAGCCGGGAGGTGAAAA

References

Reviews

• 17942072