SubtiBank SubtiBank
ykcC [2018-02-13T12:57:56.000Z]
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ykcC [2018-02-13T12:57:56.000Z]

similar to lipoteichoic acid glycosyltransferase
Locus
BSU12890
Isoelectric point
8.01
Molecular weight
37.22 kDa
Protein length
323 aa Sequence Blast
Gene length
969 bp Sequence Blast
Function
decoration of lipoteichoic acid with galactose residues
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Groups of genes → Membrane proteins
  • Groups of genes → Poorly characterized/ putative enzymes

    • Gene

    Coordinates
    1,356,447 → 1,357,418

    The protein

    Protein family

  • GtrB subfamily (according to Swiss-Prot)

    • Paralogous protein(s)

  • CsbB, YkoT

    • Structure

  • 5EKP (from Synechocystis sp., 47% identity) PubMed

    • Localization

  • cell membrane (heterogeneous) PubMed

    • Expression and Regulation

    Operons

    Genes
    ykcB-ykcC
    Description
    PubMed

    Regulatory mechanism

  • YclJ: activation, PubMed, in YclJ regulon
  • YrkP: activation, PubMed, in YrkP regulon
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    Biological materials

    Mutant

  • MGNA-A739 (ykcC::erm), available at the NBRP B. subtilis, Japan
  • BKE12890 (ΔykcC::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_ATGTCTGCTCATGTTTTTGC, downstream forward: _UP4_TAACCTCAAACCCCCTGTCC
  • BKK12890 (ΔykcC::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_ATGTCTGCTCATGTTTTTGC, downstream forward: _UP4_TAACCTCAAACCCCCTGTCC

    • References

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