ysmB

similar to transcriptional regulator (MarR family)

locus: BSU_28400

pI: 6.51

mw: 17.00 kDa

protein length: 146 aa

gene length: 441 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 2,904,043 → 2,904,483

The protein

[SW|Domains]

• [SW|HTH marR-type domain] (aa 9-141) (according to UniProt)

Structure

• [PDB|2RDP] (Geobacillus stearothermophilus)

Expression and Regulation

Operons

• genes: [gene|FBD63332ABDEA7D4837396A0617DA51153781CFE|ysmB]-[gene|36FF9F097682D8BA8D7359BFEAF71ACE8E9E90D8|racE]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B016 (ysmB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1015 NBRP B. subtilis, Japan]
• BKE28400 (Δ[gene|FBD63332ABDEA7D4837396A0617DA51153781CFE|ysmB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE28400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGTCCATCCCTCACTC, downstream forward: _UP4_GAAATGAAGAGAAAATGAGG
• BKK28400 (Δ[gene|FBD63332ABDEA7D4837396A0617DA51153781CFE|ysmB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK28400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGTCCATCCCTCACTC, downstream forward: _UP4_GAAATGAAGAGAAAATGAGG

References

• 22383849