yvoD [2019-02-04 16:27:08]

unknown

locus: BSU34980

pI: 9.84

mw: 33.45 kDa

protein length: 312 aa

gene length: 939 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,592,457 → 3,593,395

Expression and Regulation

Operons

• genes: [gene|771F205F818A755A661B8E1C95365A4F6AEB05C7|hprK]-[gene|2EB790AD1872ABCB57B784296C04C773AEA9C22B|lgt]-[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]-[gene|F3970DC380899E0505E80EB327AE27AFDE0F166F|yvoE]-[gene|C6B0EF2CD33D0F5455726167AE8F510619C3F6CA|yvoF]
  description: [Pubmed|9465101]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|23667565], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

Biological materials

Mutant

• GP2943 Δ(''[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]'')::''cat'', available in [SW|Jörg Stülke]'s lab
• MGNA-A389 (yvoD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/389 NBRP B. subtilis, Japan]
• GP851 (Δ([gene|2EB790AD1872ABCB57B784296C04C773AEA9C22B|lgt]-[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]-[gene|F3970DC380899E0505E80EB327AE27AFDE0F166F|yvoE]-[gene|C6B0EF2CD33D0F5455726167AE8F510619C3F6CA|yvoF])::aphA3), available in [SW|Jörg Stülke]'s lab
• BKE34980 (Δ[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCCTCATCCCCCTTTGT, downstream forward: _UP4_TCAGCGGTTGGAAAGGAAGC
• BKK34980 (Δ[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCCTCATCCCCCTTTGT, downstream forward: _UP4_TCAGCGGTTGGAAAGGAAGC

References

• 9465101