SubtiBank SubtiBank
yvoD
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yvoD

unknown
locus
BSU_34980
pI
9.84
mw
33.45 kDa
protein length
312 aa Sequence Blast
gene length
939 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    3,592,457 → 3,593,395

    The protein

    [SW|Localization]

  • cell membrane (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|771F205F818A755A661B8E1C95365A4F6AEB05C7|hprK]-[gene|2EB790AD1872ABCB57B784296C04C773AEA9C22B|lgt]-[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]-[gene|F3970DC380899E0505E80EB327AE27AFDE0F166F|yvoE]-[gene|C6B0EF2CD33D0F5455726167AE8F510619C3F6CA|yvoF]
    description
    [Pubmed|9465101]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|23667565], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
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    Biological materials

    Mutant

  • GP2943 Δ''[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]''::''cat'', available in [SW|Jörg Stülke]'s lab
  • MGNA-A389 (yvoD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/389 NBRP B. subtilis, Japan]
  • GP851 (Δ([gene|2EB790AD1872ABCB57B784296C04C773AEA9C22B|lgt]-[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]-[gene|F3970DC380899E0505E80EB327AE27AFDE0F166F|yvoE]-[gene|C6B0EF2CD33D0F5455726167AE8F510619C3F6CA|yvoF])::aphA3), available in [SW|Jörg Stülke]'s lab
  • BKE34980 (Δ[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCCTCATCCCCCTTTGT, downstream forward: _UP4_TCAGCGGTTGGAAAGGAAGC
  • BKK34980 (Δ[gene|FA32AD908196BDA5C2C7C26EA08FB8416182CC3D|yvoD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCCTCATCCCCCTTTGT, downstream forward: _UP4_TCAGCGGTTGGAAAGGAAGC

    • References

  • 9465101