SubtiBank SubtiBank
ymfC
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ymfC

similar to transcriptional regulator (GntR family)
Locus
BSU_16810
Isoelectric point
6.40
Molecular weight
27.75 kDa
Protein length
241 aa Sequence Blast
Gene length
726 bp Sequence Blast
Function
unknown
Product
transcriptional regulator (GntR family)
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → Regulation of gene expression → Transcription factors and their control → Transcription factor/ other/ based on similarity

    • Gene

    Coordinates
    1,754,785 → 1,755,510

    The protein

    Protein family

  • GntR family of transcription factors

    • Domains

  • HTH gntR-type domain (aa 8-76) (according to UniProt)

    • Structure

  • 2WV0 (NagR, corresponds to aa 83 ... 307 of YmfC, 30% identity)

    • Expression and Regulation

    Operons

    Genes
    ymfC
    Description
    PubMed
    view in new tab

    Genes
    spoIIIE-ymfC
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B115 (ymfC::erm), available at the NBRP B. subtilis, Japan
  • BKE16810 (ΔymfC::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTTCCCCTCCGTAAAC, downstream forward: _UP4_TAAAAACGGACGCCTGTATG
  • BKK16810 (ΔymfC::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTTCCCCTCCGTAAAC, downstream forward: _UP4_TAAAAACGGACGCCTGTATG

    • References

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