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rhaR [Tue Dec 13 2016 11:16:36 GMT+0100 (CET)]
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rhaR [Tue Dec 13 2016 11:16:36 GMT+0100 (CET)]

transcriptional regulator (DeoR family) of the rhaEW-rhaR-rhaB-rhaM-rhaA operon
locus
BSU31210
pI
7.00
mw
28.00 kDa
function
control of rhamnose utilization
product
transcriptional regulator (DeoR family)
essential
no
synonyms
yulB

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.12|Utilization of rhamnose]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.5|Transcription factors/ other]
  • [SW|Categories] containing this gene/protein

  • [SW|utilization of specific carbon sources], [SW|transcription factors and their control]
  • This gene is a member of the following [SW|regulons]

  • [SW|CcpA regulon], [SW|RhaR regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    3,201,027 -> 3,201,803

    The protein

    Effectors of protein activity

  • molecular inducer: rhamnulose-1-phosphate [Pubmed|26712933]
  • Expression and Regulation

    Operon

  • ''[SW|rhaEW]-[protein|search|rhaR]-[protein|search|rhaB]-[protein|search|rhaM]-[protein|search|rhaA]'' [Pubmed|26712933,22383849]
  • ''[protein|search|rhaR]-[protein|search|rhaB]-[protein|search|rhaM]-[protein|search|rhaA]'' [Pubmed|22383849]
  • [SW|Sigma factor]

  • [SW|SigA] [Pubmed|26712933]
  • Regulation

  • induced by rhamnose (molecular inducer: rhamnulose-1-phosphate) ([SW|RhaR]) [Pubmed|26712933]
  • repressed in the presence of glucose and other preferred carbon sources ([SW|CcpA]) [Pubmed|26712933]
  • Regulatory mechanism

  • [SW|RhaR]: transcription repression [Pubmed|26712933]
  • [SW|CcpA]: transcription repression [Pubmed|26712933]
  • References

  • 26712933,24391637,22383849