SubtiBank SubtiBank
ylxR
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ylxR

nucleoid-associated protein
Locus
BSU_16610
Isoelectric point
10.09
Molecular weight
10.27 kDa
Protein length
91 aa Sequence Blast
Gene length
276 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
ymxB
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Groups of genes → Proteins of unknown function

    • Gene

    Coordinates
    1,733,410 → 1,733,685

    The protein

    Structure

  • 1G2R (from Streptococcus pneumoniae, 47% identity) PubMed

    • Expression and Regulation

    Operons

    Genes
    ylxS-nusA-ylxR-rplGA-infB-ylxP-rbfA
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon
  • SigB: sigma factor, PubMed, in SigB regulon

    • Regulatory mechanism

  • stringent response: negative regulation, in stringent response
  • NusA: attenuation, NusA stimulates termination [Reference|http://www.nature.com/articles/nmicrobiol20157], in NusA regulon

    • Regulation

  • autoregulation NusA reference
  • induced by glucose PubMed
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    Biological materials

    Mutant

  • MGNA-B078 (ylxR::erm), available at the NBRP B. subtilis, Japan
  • BKE16610 (ΔylxR::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CACCTAAAGTCACCTCTTAT, downstream forward: _UP4_CTGGCGGAAAAGGTGAAAAA
  • BKK16610 (ΔylxR::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CACCTAAAGTCACCTCTTAT, downstream forward: _UP4_CTGGCGGAAAAGGTGAAAAA

    • References

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