SubtiBank SubtiBank
yvkA [2019-06-26 07:58:27]
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yvkA [2019-06-26 07:58:27]

similar to multidrug-efflux transporter
locus
BSU35210
pI
9.91
mw
47.63 kDa
protein length
444 aa Sequence Blast
gene length
1335 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,618,964 → 3,620,298

    The protein

    Protein family

  • [SW|major facilitator superfamily] (according to UniProt)
  • TCR/tet family (according to Swiss-Prot)

    • [SW|Localization]

  • cell membrane (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|7235F9D0048961BBD93FA6A4322018029A607435|yvkC]-[gene|672EAC84789910ADB2C2A449910BEECA39A9A2B1|yvkB]-[gene|F4028F82CCF1A0335D1ABF823645A36D9072F17F|yvkA]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A342 (yvkA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/342 NBRP B. subtilis, Japan]
  • BKE35210 (Δ[gene|F4028F82CCF1A0335D1ABF823645A36D9072F17F|yvkA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGGGATCCTCCTTTTTA, downstream forward: _UP4_TAACACAAAACAGCCCGGCA
  • BKK35210 (Δ[gene|F4028F82CCF1A0335D1ABF823645A36D9072F17F|yvkA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGGGATCCTCCTTTTTA, downstream forward: _UP4_TAACACAAAACAGCCCGGCA