yozO

unknown

locus: BSU_19290

pI: 8.44

mw: 13.00 kDa

protein length: 114 aa

gene length: 345 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]

Gene

Coordinates: 2,099,446 → 2,099,790

The protein

Structure

• [PDB|3DCX] (from Shewanella loihica, 32% identity) [pubmed|19913036]

Expression and Regulation

Operons

• genes: [gene|F2037CBE540F5D57FA93E3504960C771A55DC29C|yozO]
  description: [Pubmed|11866510]

  sigma factors

  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|11866510], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]

  regulation

  • induced by alkali shock ([protein|search|SigW]) [Pubmed|11866510]

Biological materials

Mutant

• MGNA-B418 (yozO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1417 NBRP B. subtilis, Japan]
• BKE19290 (Δ[gene|F2037CBE540F5D57FA93E3504960C771A55DC29C|yozO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGAAGAACCCCTCTTTC, downstream forward: _UP4_TGAATATTTGATGAGCCAGC
• BKK19290 (Δ[gene|F2037CBE540F5D57FA93E3504960C771A55DC29C|yozO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGAAGAACCCCTCTTTC, downstream forward: _UP4_TGAATATTTGATGAGCCAGC

References

• 11866510,19913036