SubtiBank SubtiBank
ydfI
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ydfI

two-component response regulator, control of ydfJ expression
Locus
BSU_05420
Isoelectric point
5.38
Molecular weight
23.83 kDa
Protein length
213 aa Sequence Blast
Gene length
642 bp Sequence Blast
Function
control of ydfJ expression
Product
two-component response regulator
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → Regulation of gene expression → Transcription factors and their control → Two-component system response regulators
  • Groups of genes → Phosphoproteins → Phosphorylation on an Asp residue

    • Gene

    Coordinates
    588,960 → 589,601

    The protein

    Paralogous protein(s)

  • YxjL, LnrK, LiaR, YhcZ

    • Domains

  • Response regulatory domain (aa 3-118) (according to UniProt)
  • HTH luxR-type domain (aa 142-207) (according to UniProt)

    • Modification

  • phosphorylation by YdfH on an Asp residue

    • Structure

  • 5HEV (LiaR from Enterococcus faecium, 37% identity) PubMed

    • Localization

  • cytoplasma (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    Genes
    ydfH-ydfI
    Description
    PubMed
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    Biological materials

    Mutant

  • MGNA-C148 (ydfI::erm), available at the NBRP B. subtilis, Japan
  • BKE05420 (ΔydfI::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AAGATGGTCATCAACGATTA, downstream forward: _UP4_TAAACTGCATATTTGAAAAT
  • BKK05420 (ΔydfI::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AAGATGGTCATCAACGATTA, downstream forward: _UP4_TAAACTGCATATTTGAAAAT

    • References

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